Basic Information
Locus ID:
Thhalv10006624m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
(E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 9913397 | 9918684 | - | Thhalv10006624m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 124,421.72 Da | 52.69 | 70.85 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 848 | 1105 | 4.11345E-110 | - |
| CDD | cd06410 | PB1_UP2 | 143 | 239 | 3.78231E-48 | - |
| Pfam | PF00564 | PB1 domain | 155 | 240 | 1.5E-21 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 843 | 1104 | 2.3E-60 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 156 | 242 | 3.07E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 827 | 1103 | 4.99E-75 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 158 | 241 | 1.2E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 930 | 1127 | 7.8E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 835 | 929 | 5.5E-25 | - |
| SMART | SM00220 | serkin_6 | 842 | 1108 | 4.6E-56 | IPR000719 |
| SMART | SM00666 | PB1_new | 154 | 241 | 5.3E-34 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 842 | 1107 | 40.654343 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 848 | 873 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 967 | 979 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1032 | 1054 | 1.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 924 | 937 | 1.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1076 | 1098 | 1.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 961 | 979 | 1.0E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 618 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 533 | - | - |
| Coils | Coil | Coil | 208 | 228 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_006416835.1 | uncharacterized protein LOC18993265 [Eutrema salsugineum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | V4L610 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10006624mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology