Basic Information
Locus ID:
Thhalv10006561m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 395495 | 401739 | - | Thhalv10006561m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 165,423.94 Da | 40.88 | 79.08 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1185 | 1447 | 4.20991E-129 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 170 | 433 | 4.27139E-102 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1224 | 1391 | 3.4E-37 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 187 | 425 | 2.1E-19 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1184 | 1447 | 3.01E-76 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 232 | 400 | 5.76E-25 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1134 | 1305 | 1.3E-34 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1307 | 1448 | 2.4E-41 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 231 | 400 | 2.1E-31 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1154 | 1448 | 1.1E-90 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1127 | 1447 | 56.421795 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 965 | 989 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 557 | 593 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 975 | 989 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 132 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_024007786.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Eutrema salsugineum] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | V4K6Y2 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10006561mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology