Basic Information
Locus ID:
Thhalv10006490m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_19 | 1789148 | 1789561 | - | Thhalv10006490m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 15,431.59 Da | 59.56 | 86.16 | -0.41 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43270.2 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_024012756.1 | F-box/kelch-repeat protein At2g43270 [Eutrema salsugineum] | 0 |
| Q1PEU9 | F-box/kelch-repeat protein At2g43270 OS=Arabidopsis thaliana OX=3702 GN=At2g43270 PE=2 SV=1 | 0 | |
| TrEMBL | V4LWH3 | F-box domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10006490mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 8 | AT1G49790.2, AT2G30615.1, AT2G42955.1, AT2G43260.1 ... |
| Brassicaceae | Eutrema salsugineum | 8 | Thhalv10001524m.g.v1.0, Thhalv10005447m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g31660.v2.2 |
| Brassicaceae | Brassica nigra | 11 | BniB01g002760.2N, BniB01g011350.2N, BniB02g072460.2N ... |