Basic Information
Locus ID:
Thhalv10006026m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
ATMRK1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_19 | 83221 | 85340 | + | Thhalv10006026m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 42,704.28 Da | 39.05 | 73.72 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 91 | 364 | 3.43247E-110 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 86 | 364 | 1.6E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 60 | 364 | 1.5E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 191 | 375 | 2.8E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 74 | 165 | 8.7E-20 | - |
| SMART | SM00220 | serkin_6 | 85 | 367 | 2.8E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 85 | 367 | 40.838085 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 231 | 243 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 187 | 200 | 1.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 291 | 313 | 1.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 335 | 357 | 1.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 225 | 243 | 1.4E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63260.1 | Protein kinase superfamily protein. protein kinase, similar to mammal mixed-lineage kinase and Raf protein kinase | 0 |
| RefSeq | XP_006402293.1 | serine/threonine-protein kinase STY13 [Eutrema salsugineum] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | E4MVW9 | mRNA, clone: RTFL01-04-P23 OS=Eutrema halophilum OX=98038 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology