Basic Information
Locus ID:
Thhalv10005898m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
receptor-like protein kinase At2g42960
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_19 | 1536021 | 1539610 | - | Thhalv10005898m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 57,447.00 Da | 44.39 | 90.82 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 196 | 462 | 1.46697E-103 | - |
| Pfam | PF00069 | Protein kinase domain | 192 | 459 | 2.0E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 174 | 469 | 2.02E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 172 | 265 | 6.2E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 266 | 481 | 1.4E-66 | - |
| SMART | SM00220 | serkin_6 | 190 | 469 | 2.5E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 190 | 469 | 40.371662 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 312 | 324 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 196 | 219 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 513 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006402719.1 | probable receptor-like protein kinase At2g42960 [Eutrema salsugineum] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | V4LNX2 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005898mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology