Basic Information
Locus ID:
Thhalv10005884m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
CPK32
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_19 | 2110292 | 2113444 | + | Thhalv10005884m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 60,346.10 Da | 35.98 | 83.45 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 58 | 316 | 3.79315E-138 | - |
| CDD | cd00051 | EFh | 436 | 497 | 6.40379E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 435 | 497 | 2.0E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 365 | 424 | 3.0E-7 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 59 | 317 | 3.6E-76 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 325 | 4.59E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 346 | 523 | 1.38E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 326 | 500 | 2.1E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 145 | 325 | 2.9E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 61 | 144 | 9.0E-28 | - |
| SMART | SM00054 | efh_1 | 364 | 392 | 2.7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 59 | 317 | 5.8E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 436 | 464 | 7.1E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 400 | 428 | 5.1 | IPR002048 |
| SMART | SM00054 | efh_1 | 471 | 499 | 1.9E-6 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 317 | 48.569382 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 467 | 502 | 14.876045 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 466 | 11.779655 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 396 | 431 | 8.54379 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 360 | 395 | 10.050141 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 65 | 92 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 480 | 492 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 409 | 421 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 0 |
| RefSeq | XP_006402868.1 | calcium-dependent protein kinase 32 [Eutrema salsugineum] | 0 |
| Q6NLQ6 | Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana OX=3702 GN=CPK32 PE=1 SV=1 | 0 | |
| TrEMBL | V4NE31 | Calcium-dependent protein kinase 32 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005884mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology