Basic Information
Locus ID:
Thhalv10005864m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_19 | 76513 | 79644 | - | Thhalv10005864m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 64,204.97 Da | 52.66 | 77.50 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 14 | 269 | 5.65447E-136 | - |
| Pfam | PF00069 | Protein kinase domain | 15 | 268 | 1.3E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 319 | 1.27E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 94 | 3.6E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 97 | 331 | 1.0E-58 | - |
| SMART | SM00220 | serkin_6 | 15 | 269 | 8.0E-84 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 269 | 46.618893 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 21 | 44 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 136 | 148 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 467 | 504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 336 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63280.1 | NIMA-related kinase 4. Encodes AtNek4, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_024012783.1 | serine/threonine-protein kinase Nek4 [Eutrema salsugineum] | 0 |
| Q8RXT4 | Serine/threonine-protein kinase Nek4 OS=Arabidopsis thaliana OX=3702 GN=NEK4 PE=2 SV=1 | 0 | |
| TrEMBL | V4LJ37 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005864mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology