Basic Information
Locus ID:
Thhalv10005861m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_19 | 2450193 | 2453897 | + | Thhalv10005861m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 64,351.19 Da | 50.99 | 86.35 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 122 | 384 | 7.09123E-128 | - |
| Pfam | PF00069 | Protein kinase domain | 123 | 385 | 4.7E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 416 | 566 | 3.19E-18 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 120 | 446 | 2.16E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 405 | 567 | 1.0E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 209 | 404 | 2.3E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 119 | 208 | 3.6E-22 | - |
| SMART | SM00220 | serkin_6 | 123 | 385 | 4.2E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 123 | 385 | 49.714237 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 129 | 155 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56760.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006402951.1 | CDPK-related kinase 7 [Eutrema salsugineum] | 0 |
| Q9LET1 | CDPK-related kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=1 SV=1 | 0 | |
| TrEMBL | V4LKX5 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005861mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology