Basic Information
Locus ID:
Thhalv10005840m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_19 | 679972 | 682721 | - | Thhalv10005840m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 69,107.87 Da | 51.14 | 79.59 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 197 | 279 | 7.45911E-15 | - |
| Pfam | PF00651 | BTB/POZ domain | 196 | 293 | 2.2E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 319 | 411 | 3.9E-9 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 192 | 293 | 1.8E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 495 | 609 | 9.81E-7 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 327 | 434 | 7.6E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 189 | 316 | 2.2E-18 | IPR011333 |
| SMART | SM00875 | BACK_2 | 311 | 413 | 8.6E-8 | IPR011705 |
| SMART | SM00225 | BTB_4 | 196 | 296 | 1.0E-10 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 196 | 265 | 14.418399 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_006402466.1 | BTB/POZ domain-containing protein POB1 isoform X1 [Eutrema salsugineum] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | V4LJJ6 | BTB domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005840mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology