Basic Information
Locus ID:
Thhalv10005820m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_19 | 853187 | 857025 | - | Thhalv10005820m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.57 | 77,582.99 Da | 39.67 | 82.17 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 366 | 661 | 1.33975E-126 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 335 | 647 | 1.4E-97 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 366 | 671 | 1.52E-69 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 368 | 665 | 1.4E-43 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 154 | - | - |
| Coils | Coil | Coil | 238 | 265 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_006402518.1 | polygalacturonate 4-alpha-galacturonosyltransferase [Eutrema salsugineum] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | V4ND83 | Hexosyltransferase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005820mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology