Basic Information
Locus ID:
Thhalv10005698m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 696211 | 699567 | - | Thhalv10005698m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 88,226.13 Da | 28.48 | 102.70 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 68 | 1.5E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 605 | 795 | 1.0E-25 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 379 | 556 | 4.85E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 597 | 795 | 6.61E-44 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 76 | 376 | 3.77E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 589 | 795 | 1.1E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 187 | 1.0E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 247 | 333 | 1.3E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 334 | 552 | 4.0E-54 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 246 | 1.5E-13 | IPR032675 |
| SMART | SM00220 | serkin_6 | 602 | 793 | 1.6E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 602 | 795 | 29.219938 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 608 | 631 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 740 | 752 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_018457995.1 | PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Raphanus sativus] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | V4K0B5 | Protein kinase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005698mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology