Basic Information
Locus ID:
Thhalv10005575m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 3822857 | 3825611 | - | Thhalv10005575m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 78,224.91 Da | 45.33 | 82.22 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 16 | 152 | 8.96082E-39 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 424 | 676 | 4.1E-41 | IPR001245 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 129 | 5.94E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 404 | 675 | 8.09E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 399 | 493 | 3.8E-26 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 9 | 137 | 1.1E-5 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 694 | 1.2E-49 | - |
| SMART | SM00220 | serkin_6 | 421 | 685 | 1.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 685 | 35.184486 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 539 | 551 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 225 | - | - |
| Coils | Coil | Coil | 338 | 367 | - | - |
| Coils | Coil | Coil | 370 | 398 | - | - |
| Coils | Coil | Coil | 287 | 307 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26150.1 | protein kinase family protein. | 0 |
| RefSeq | XP_024006829.1 | U-box domain-containing protein 51 [Eutrema salsugineum] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | V4K3S4 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005575mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology