Basic Information
Locus ID:
Thhalv10005419m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 8466919 | 8468388 | + | Thhalv10005419m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 34,252.62 Da | 39.17 | 100.40 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 264 | 4.9E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 286 | 1.46E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 80 | 282 | 5.7E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 77 | 3.3E-19 | - |
| SMART | SM00220 | serkin_6 | 3 | 267 | 3.5E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 3 | 286 | 35.806381 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 122 | 134 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 9 | 31 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35960.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_006395925.2 | receptor-like cytosolic serine/threonine-protein kinase RBK2 [Eutrema salsugineum] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | V4MNN3 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005419mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology