halophFGD

Basic Information

Locus ID: Thhalv10005366m.g.v1.0

Species & Taxonomic ID: Eutrema salsugineum & 72664

Genome Assembly: GCF_000478725.1

Description: Oleosin 18.2 kDa-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold_6	5878334	5879361	-	Thhalv10005366m.g.v1.0

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.68	22,010.86 Da	36.92	94.63	0.04

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01277	Oleosin	49	161	4.0E-43	IPR000136
ProSitePatterns	PS00811	Oleosins signature.	74	96	-	IPR000136

Gene Ontology

Cellular Component:

GO:0012511 (monolayer-surrounded lipid storage body) GO:0016020 (membrane)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G27660.1	oleosin 4. Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798.
RefSeq	XP_024007352.1	oleosin S2-2 [Eutrema salsugineum]
Swiss-Prot	Q42431	Oleosin 20.3 kDa OS=Arabidopsis thaliana OX=3702 GN=OL2 PE=2 SV=1
TrEMBL	V4MMF6	Oleosin OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005366mg PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg19855, jg30471
Aizoaceae	Mesembryanthemum crystallinum	5	gene_19742, gene_24281, gene_26017, gene_3088, gene_8117
Amaranthaceae	Atriplex hortensis	7	Ah000552, Ah001404, Ah018181, Ah024380, Ah026998, Ah035080 ... Ah035280
Amaranthaceae	Beta vulgaris	3	BVRB_2g024090, BVRB_2g032920, BVRB_5g117750
Amaranthaceae	Salicornia bigelovii	10	Sbi_jg15195, Sbi_jg21392, Sbi_jg21953, Sbi_jg22460 ... Sbi_jg29599, Sbi_jg30593, Sbi_jg30904, Sbi_jg56019, Sbi_jg58375, Sbi_jg58662
Amaranthaceae	Salicornia europaea	5	Seu_jg15794, Seu_jg16337, Seu_jg26498, Seu_jg28255 ... Seu_jg28528
Amaranthaceae	Suaeda aralocaspica	6	GOSA_00004834, GOSA_00014891, GOSA_00016426, GOSA_00018158 ... GOSA_00018159, GOSA_00020204
Amaranthaceae	Suaeda glauca	11	Sgl02218, Sgl07374, Sgl54919, Sgl55173, Sgl60174, Sgl60421 ... Sgl62895, Sgl63113, Sgl66844, Sgl67507, Sgl67727
Amaranthaceae	Chenopodium album	15	gene:ENSEOMG00000004852, gene:ENSEOMG00000005570 ... gene:ENSEOMG00000012356, gene:ENSEOMG00000017248, gene:ENSEOMG00000017354, gene:ENSEOMG00000019977, gene:ENSEOMG00000020177, gene:ENSEOMG00000022282, gene:ENSEOMG00000023038, gene:ENSEOMG00000025165, gene:ENSEOMG00000025647, gene:ENSEOMG00000029839, gene:ENSEOMG00000042205, gene:ENSEOMG00000050487, gene:ENSEOMG00000051135
Amaranthaceae	Chenopodium quinoa	8	CQ.Regalona.r1.2AG0014930, CQ.Regalona.r1.2AG0021260 ... CQ.Regalona.r1.2BG0017030, CQ.Regalona.r1.3AG0009140, CQ.Regalona.r1.3BG0009400, CQ.Regalona.r1.5AG0018490, CQ.Regalona.r1.5AG0023380, CQ.Regalona.r1.5BG0019740
Anacardiaceae	Pistacia vera	3	pistato.v30139730, pistato.v30180470, pistato.v30254210
Apiaceae	Apium graveolens	10	Ag10G00117, Ag10G02698, Ag11G03206, Ag2G02597, Ag3G00866 ... Ag6G00718, Ag7G00166, Ag7G01929, Ag7G02383, Ag9G02769
Arecaceae	Cocos nucifera	8	COCNU_03G014580, COCNU_05G004250, COCNU_05G010790 ... COCNU_10G003470, COCNU_13G008010, contig69111810G000010, contig69353551G000010, scaffold136639G000010
Arecaceae	Phoenix dactylifera	9	gene-LOC103697576, gene-LOC103700664, gene-LOC103703777 ... gene-LOC103704664, gene-LOC103711567, gene-LOC103713449, gene-LOC103715173, gene-LOC103715925, gene-LOC103722275
Asparagaceae	Asparagus officinalis	2	AsparagusV1_04.3260.V1.1, AsparagusV1_Unassigned.713.V1.1
Asteraceae	Flaveria trinervia	9	Ftri13G08978, Ftri13G10719, Ftri17G02398, Ftri17G30183 ... Ftri1G29641, Ftri6G22596, Ftri8G09196, Ftri9G08035, FtriNA30355
Brassicaceae	Arabidopsis thaliana	14	AT1G48990.1, AT2G25890.1, AT3G01570.1, AT3G18570.1 ... AT3G27660.1, AT4G25140.1, AT5G07510.1, AT5G07540.1, AT5G07550.1, AT5G07560.1, AT5G07571.1, AT5G07600.1, AT5G40420.1, AT5G51210.1
Brassicaceae	Eutrema salsugineum	12	Thhalv10002154m.g.v1.0, Thhalv10005366m.g.v1.0 ... Thhalv10011990m.g.v1.0, Thhalv10014500m.g.v1.0, Thhalv10015089m.g.v1.0, Thhalv10015090m.g.v1.0, Thhalv10015579m.g.v1.0, Thhalv10015754m.g.v1.0, Thhalv10021571m.g.v1.0, Thhalv10021947m.g.v1.0, Thhalv10027215m.g.v1.0, Thhalv10028039m.g.v1.0
Brassicaceae	Schrenkiella parvula	13	Sp1g35900.v2.2, Sp2g16790.v2.2, Sp3g00480.v2.2 ... Sp3g16650.v2.2, Sp4g05730.v2.2, Sp6g13410.v2.2, Sp6g35300.v2.2, Sp6g35310.v2.2, Sp6g35320.v2.2, Sp6g35330.v2.2, Sp6g35340.v2.2, Sp7g01500.v2.2, Sp7g23140.v2.2
Brassicaceae	Brassica nigra	18	BniB01g017560.2N, BniB01g026370.2N, BniB01g045930.2N ... BniB02g028450.2N, BniB02g053370.2N, BniB02g081600.2N, BniB03g012870.2N, BniB04g007180.2N, BniB05g012100.2N, BniB05g028320.2N, BniB05g028340.2N, BniB07g006890.2N, BniB07g030010.2N, BniB07g035160.2N, BniB07g036020.2N, BniB07g051940.2N, BniB08g003280.2N, BniB08g003290.2N
Casuarinaceae	Casuarina equisetifolia	7	Ceq01G1919, Ceq02G1870, Ceq03G1152, Ceq03G2385, Ceq04G2056 ... Ceq07G2119, Ceq07G2143
Casuarinaceae	Casuarina glauca	7	Cgl03G1240, Cgl03G1249, Cgl03G2523, Cgl04G2251, Cgl07G1734 ... Cgl07G2342, Cgl07G2370
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno03g07290, gene.Cymno09g09880, gene.Cymno11g00270
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate02g21880
Malvaceae	Hibiscus hamabo Siebold & Zucc.	4	nbisL1-mrna-10325, nbisL1-mrna-1755, nbisL1-mrna-2260 ... nbisL1-mrna-6852
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG01.2404, evm.TU.LG05.309, evm.TU.LG07.851 ... evm.TU.LG10.432, evm.TU.LG10.687
Plantaginaceae	Plantago ovata	6	Pov_00003298, Pov_00004141, Pov_00024163, Pov_00033779 ... Pov_00034534, Pov_00040737
Plumbaginaceae	Limonium bicolor	3	Lb2G09167, Lb2G10567, Lb4G26316
Poaceae	Echinochloa crus-galli	13	AH01.4985, AH02.2495, AH02.2500, AH05.1290, AH09.1795 ... BH02.1187, BH05.1463, BH06.1501, CH05.1652, CH06.1633, Contig2126.2, Contig866.7, Contig931.7
Poaceae	Eleusine coracana subsp. coracana	8	gene-QOZ80_1AG0026180, gene-QOZ80_1BG0076630 ... gene-QOZ80_3AG0229960, gene-QOZ80_3BG0297790, gene-QOZ80_4AG0308500, gene-QOZ80_5AG0362190, gene-QOZ80_6AG0520580, gene-QOZ80_6BG0473060
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0091150.1.CDS1 ... HORVU.MOREX.r3.2HG0190210.1.CDS1, HORVU.MOREX.r3.4HG0335720.1.CDS1, HORVU.MOREX.r3.5HG0473570.1.CDS1, HORVU.MOREX.r3.7HG0677170.1.CDS1
Poaceae	Lolium multiflorum	10	gene-QYE76_000352, gene-QYE76_000864, gene-QYE76_004581 ... gene-QYE76_007695, gene-QYE76_015303, gene-QYE76_029766, gene-QYE76_045342, gene-QYE76_054120, gene-QYE76_062499, gene-QYE76_062702
Poaceae	Oryza coarctata	3	Oco06G021720, Oco10G017400, Oco12G009060
Poaceae	Oryza sativa	6	LOC_Os01g45624.1, LOC_Os03g49190.1, LOC_Os04g46200.1 ... LOC_Os05g50110.1, LOC_Os06g27910.1, LOC_Os09g15520.1
Poaceae	Paspalum vaginatum	5	gene-BS78_01G116100, gene-BS78_03G210100 ... gene-BS78_06G178500, gene-BS78_09G245700, gene-BS78_10G179800
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0505555
Poaceae	Sporobolus alterniflorus	9	Chr02G014330, Chr04G026400, Chr05G019390, Chr07G025370 ... Chr0G019550, Chr22G000670, Chr23G007330, Chr25G006100, Chr26G012430
Poaceae	Thinopyrum elongatum	8	Tel1E01G687000, Tel2E01G711200, Tel3E01G395200 ... Tel4E01G070400, Tel5E01G310200, Tel7E01G107300, Tel7E01G110000, Tel7E01G419900
Poaceae	Triticum dicoccoides	12	gene_TRIDC1AG061070, gene_TRIDC1BG070020 ... gene_TRIDC2AG060270, gene_TRIDC2BG063710, gene_TRIDC3AG034690, gene_TRIDC3BG039100, gene_TRIDC4AG042910, gene_TRIDC4BG006060, gene_TRIDC5AG029850, gene_TRIDC5BG031530, gene_TRIDC7AG030120, gene_TRIDC7BG020940
Poaceae	Triticum aestivum	11	TraesCS1A02G415100.1.cds1, TraesCS1B02G445100.1.cds1 ... TraesCS1D02G422600.1.cds1, TraesCS2A02G417500.1.cds1, TraesCS2B02G436400.1.cds1, TraesCS2D02G414800.1.cds1, TraesCS5B02G181700.1.cds1, TraesCS5D02G188400.1.cds1, TraesCS7A02G234100.1.cds1, TraesCS7B02G132500.1.cds1, TraesCS7D02G234400.1.cds1
Poaceae	Zea mays	7	Zm00001eb000200_P001, Zm00001eb053890_P001 ... Zm00001eb074940_P001, Zm00001eb158660_P001, Zm00001eb216880_P001, Zm00001eb344420_P001, Zm00001eb382400_P001
Poaceae	Zoysia japonica	11	nbis-gene-14733, nbis-gene-15828, nbis-gene-24778 ... nbis-gene-25879, nbis-gene-28828, nbis-gene-37246, nbis-gene-4810, nbis-gene-5460, nbis-gene-57052, nbis-gene-58038, nbis-gene-58201
Poaceae	Zoysia macrostachya	8	Zma_g10744, Zma_g20173, Zma_g21732, Zma_g28858, Zma_g29662 ... Zma_g3018, Zma_g4633, Zma_g705
Portulacaceae	Portulaca oleracea	6	evm.TU.LG01.2704, evm.TU.LG07.735, evm.TU.LG10.1018 ... evm.TU.LG11.1486, evm.TU.LG15.202, evm.TU.LG17.1027
Posidoniaceae	Posidonia oceanica	3	gene.Posoc02g17970, gene.Posoc04g00730, gene.Posoc06g05790
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_11_RagTag.168, evm.TU.Scaffold_4_RagTag.445 ... evm.TU.Scaffold_4_RagTag.790
Rhizophoraceae	Carallia pectinifolia	8	nbisL1-mrna-12422, nbisL1-mrna-12535, nbisL1-mrna-14942 ... nbisL1-mrna-2398, nbisL1-mrna-2578, nbisL1-mrna-28570, nbisL1-mrna-28917, nbisL1-mrna-29092
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-10091, nbisL1-mrna-20740, nbisL1-mrna-6767
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-12617, nbisL1-mrna-1588
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000008l.102, add.evm.TU.utg000008l.180 ... add.evm.TU.utg000008l.285
Rhizophoraceae	Kandelia obovata	1	Maker00000856
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-16902, nbisL1-mrna-17044, nbisL1-mrna-20626 ... nbisL1-mrna-22639
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-1437, nbisL1-mrna-19058, nbisL1-mrna-1918
Salicaceae	Populus euphratica	10	populus_peu01074, populus_peu03801, populus_peu05254 ... populus_peu11896, populus_peu12714, populus_peu28691, populus_peu29780, populus_peu30119, populus_peu34640, populus_peu37011
Solanaceae	Lycium barbarum	9	gene-LOC132623474, gene-LOC132624810, gene-LOC132632611 ... gene-LOC132634347, gene-LOC132635158, gene-LOC132636579, gene-LOC132637402, gene-LOC132638598, gene-LOC132640956
Solanaceae	Solanum chilense	10	SOLCI002260700, SOLCI002514500, SOLCI002730000 ... SOLCI002808900, SOLCI005214500, SOLCI005606400, SOLCI005703400, SOLCI005822500, SOLCI006019600, SOLCI006255400
Solanaceae	Solanum pennellii	8	gene-LOC107006693, gene-LOC107010500, gene-LOC107013802 ... gene-LOC107013805, gene-LOC107022710, gene-LOC107022849, gene-LOC107023723, gene-LOC107028082
Tamaricaceae	Reaumuria soongarica	4	STRG.14174_chr08_-, gene_13838, gene_17213, gene_4293
Tamaricaceae	Tamarix chinensis	4	TC05G0180, TC06G2038, TC08G2496, TC09G0970
Zosteraceae	Zostera marina	1	Zosma01g06700.v3.1