Basic Information
Locus ID:
Thhalv10005144m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 6211396 | 6213226 | - | Thhalv10005144m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 13,404.45 Da | 61.05 | 80.42 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 6 | 94 | 4.60312E-45 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 118 | 1.5E-38 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 97 | 1.48E-27 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 99 | 1.2E-42 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 120 | 4.1E-51 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 73 | 10.418738 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26980.1 | membrane-anchored ubiquitin-fold protein 4 precursor. | 0 |
| RefSeq | XP_024007108.1 | membrane-anchored ubiquitin-fold protein 4 [Eutrema salsugineum] | 0 |
| Q9LSD8 | Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1 | 0 | |
| TrEMBL | V4KZ96 | Membrane-anchored ubiquitin-fold protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005144mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology