Basic Information
Locus ID:
Thhalv10004532m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 739360 | 742145 | - | Thhalv10004532m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 36,490.97 Da | 44.59 | 70.53 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 67 | 327 | 1.6E-85 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 214 | 318 | 5.89E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 213 | 331 | 5.3E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 217 | 319 | 26.019646 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.1 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_006394001.1 | auxin-responsive protein IAA9 isoform X1 [Eutrema salsugineum] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | V4KV92 | Auxin-responsive protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10004532mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology