Basic Information
Locus ID:
Thhalv10004392m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 577370 | 580007 | - | Thhalv10004392m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 43,730.50 Da | 41.72 | 85.96 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 166 | 206 | 2.25E-4 | - |
| CDD | cd18313 | BTB_POZ_BT | 63 | 164 | 1.85896E-59 | - |
| Pfam | PF00651 | BTB/POZ domain | 57 | 162 | 8.6E-9 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 248 | 333 | 4.7E-14 | IPR000197 |
| SUPERFAMILY | SSF57933 | TAZ domain | 241 | 342 | 1.57E-24 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 43 | 161 | 3.69E-13 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 240 | 361 | 2.9E-24 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 165 | 239 | 1.8E-7 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 42 | 163 | 1.8E-15 | IPR011333 |
| SMART | SM00551 | TAZ_2 | 241 | 334 | 6.6E-46 | IPR000197 |
| SMART | SM00225 | BTB_4 | 64 | 164 | 8.2E-10 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 64 | 132 | 9.682221 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67480.1 | BTB and TAZ domain protein 4. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. | 0 |
| RefSeq | XP_006393955.1 | BTB/POZ and TAZ domain-containing protein 4 [Eutrema salsugineum] | 0 |
| Q9FJX5 | BTB/POZ and TAZ domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BT4 PE=1 SV=1 | 0 | |
| TrEMBL | V4MIQ5 | BTB domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10004392mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology