Basic Information
Locus ID:
Thhalv10004342m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 255034 | 257356 | + | Thhalv10004342m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 45,467.94 Da | 38.63 | 81.97 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 76 | 329 | 8.39107E-107 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 71 | 328 | 5.4E-57 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 61 | 338 | 9.44E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 43 | 366 | 6.7E-77 | - |
| SMART | SM00220 | serkin_6 | 70 | 336 | 6.2E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 70 | 333 | 41.021828 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 191 | 203 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 300 | 322 | 6.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 147 | 160 | 6.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 185 | 203 | 6.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 258 | 280 | 6.6E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04013 (MAPK signaling pathway - fly)
map04013 (MAPK signaling pathway - fly)
map04064 (NF-kappa B signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04214 (Apoptosis - fly)
map04214 (Apoptosis - fly)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
map04620 (Toll-like receptor signaling pathway)
map04621 (NOD-like receptor signaling pathway)
map04622 (RIG-I-like receptor signaling pathway)
ko04624 (Toll and Imd signaling pathway)
map04624 (Toll and Imd signaling pathway)
map04657 (IL-17 signaling pathway)
map04660 (T cell receptor signaling pathway)
map04668 (TNF signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66710.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006393864.1 | serine/threonine-protein kinase HT1 [Eutrema salsugineum] | 0 |
| Q8RWL6 | Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1 | 0 | |
| TrEMBL | V4JZZ9 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10004342mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology