Basic Information
Locus ID:
Thhalv10004183m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Receptor-like cytosolic serine threonine-protein kinase RBK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 805655 | 808261 | + | Thhalv10004183m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 51,348.69 Da | 49.28 | 81.93 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 158 | 406 | 9.4E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 139 | 416 | 3.1E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 230 | 425 | 1.5E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 129 | 229 | 1.2E-24 | - |
| SMART | SM00220 | serkin_6 | 155 | 410 | 4.7E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 155 | 416 | 31.552048 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 161 | 184 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 263 | 275 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| Coils | Coil | Coil | 3 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006394019.2 | receptor-like cytosolic serine/threonine-protein kinase RBK1 [Eutrema salsugineum] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A565CX25 | Protein kinase domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS28581 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology