Basic Information
Locus ID:
Thhalv10004158m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 6096249 | 6098113 | + | Thhalv10004158m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 52,527.26 Da | 44.19 | 79.20 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 260 | 328 | 4.71E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 210 | 259 | 1.44E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 210 | 324 | 7.8E-14 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 203 | 250 | 8.83511 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27290.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_006395459.1 | F-box protein At3g27290 [Eutrema salsugineum] | 0 |
| Q9LK24 | F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1 | 0 | |
| TrEMBL | V4K5C3 | F-box domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10004158mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology