Basic Information
Locus ID:
Thhalv10004125m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 5619077 | 5622387 | - | Thhalv10004125m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 52,682.00 Da | 38.93 | 77.00 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 132 | 409 | 2.67921E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 130 | 406 | 5.9E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 107 | 406 | 1.91E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 102 | 211 | 9.6E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 212 | 427 | 8.4E-64 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 126 | 412 | 38.505974 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 255 | 267 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 132 | 164 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 476 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G28690.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006395351.1 | probable serine/threonine-protein kinase PIX7 isoform X3 [Eutrema salsugineum] | 0 |
| F4J0D2 | Serine/threonine-protein kinase PBL36 OS=Arabidopsis thaliana OX=3702 GN=PBL36 PE=1 SV=2 | 0 | |
| TrEMBL | V4KRL0 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10004125mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology