Basic Information
Locus ID:
Thhalv10004015m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
WRKY3
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 6979477 | 6983641 | + | Thhalv10004015m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.70 | 56,138.18 Da | 58.55 | 52.69 | -0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 249 | 305 | 2.4E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 416 | 473 | 2.0E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 246 | 307 | 1.44E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 407 | 475 | 8.5E-30 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 400 | 476 | 3.3E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 223 | 308 | 1.8E-27 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 415 | 474 | 7.6E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 248 | 306 | 4.4E-36 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 243 | 307 | 23.708927 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 410 | 475 | 38.193405 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 366 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_006395712.1 | probable WRKY transcription factor 3 [Eutrema salsugineum] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | V4KZY4 | WRKY transcription factor 3 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10004015mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology