Basic Information
Locus ID:
Thhalv10004013m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 7653396 | 7656685 | + | Thhalv10004013m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 55,830.90 Da | 34.25 | 92.67 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 39 | 358 | 4.6E-87 | IPR000490 |
| Pfam | PF07983 | X8 domain | 376 | 447 | 1.1E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 39 | 358 | 1.92E-88 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 369 | 475 | 1.3E-10 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 38 | 364 | 5.2E-119 | - |
| SMART | SM00768 | X8_cls | 375 | 460 | 1.0E-49 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 273 | 286 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_006395867.1 | glucan endo-1,3-beta-glucosidase 3 [Eutrema salsugineum] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | V4L0B5 | glucan endo-1,3-beta-D-glucosidase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10004013mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology