Basic Information
Locus ID:
Thhalv10003949m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 4297358 | 4301973 | - | Thhalv10003949m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.94 | 60,498.00 Da | 34.81 | 106.61 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 32 | 446 | 1.6E-57 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 149 | 200 | 9.0E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 28 | 456 | 4.9E-76 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 156 | 166 | 1.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 116 | 124 | 1.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 87 | 98 | 1.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 101 | 115 | 1.9E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27150.1 | Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. | 0 |
| RefSeq | XP_006394990.1 | sodium/hydrogen exchanger 1 [Eutrema salsugineum] | 0 |
| Q68KI4 | Sodium/hydrogen exchanger 1 OS=Arabidopsis thaliana OX=3702 GN=NHX1 PE=1 SV=2 | 0 | |
| TrEMBL | A0FH77 | Sodium/hydrogen exchanger OS=Eutrema halophilum OX=98038 GN=NHX1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology