Basic Information
Locus ID:
Thhalv10003896m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Phosphatidylinositol 4-kinase gamma
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 3112822 | 3116612 | - | Thhalv10003896m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 64,761.19 Da | 38.35 | 87.02 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 42 | 105 | 3.5E-13 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 111 | 183 | 1.1E-8 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 266 | 520 | 4.2E-57 | IPR000403 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 407 | 572 | 6.83E-9 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 84 | 183 | 3.91E-14 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 38 | 107 | 9.21E-13 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 37 | 105 | 3.5E-11 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 109 | 183 | 5.2E-11 | - |
| SMART | SM00213 | ubq_7 | 109 | 182 | 9.9E-5 | IPR000626 |
| SMART | SM00213 | ubq_7 | 33 | 104 | 5.7E-4 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 33 | 104 | 12.465626 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 109 | 186 | 11.747038 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24240.1 | Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein. | 0 |
| RefSeq | XP_006394677.1 | phosphatidylinositol 4-kinase gamma 3 [Eutrema salsugineum] | 0 |
| Q9FNF8 | Phosphatidylinositol 4-kinase gamma 3 OS=Arabidopsis thaliana OX=3702 GN=PI4KG3 PE=2 SV=1 | 0 | |
| TrEMBL | V4KX52 | 1-phosphatidylinositol 4-kinase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003896mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology