Basic Information
Locus ID:
Thhalv10003797m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
4-kinase gamma
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 6833737 | 6836978 | - | Thhalv10003797m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 72,392.41 Da | 50.99 | 77.49 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 48 | 98 | 4.2173E-4 | - |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 176 | 426 | 7.1E-50 | IPR000403 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 33 | 100 | 5.31E-6 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 30 | 112 | 3.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 594 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 530 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 594 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 530 | - | - |
| Coils | Coil | Coil | 509 | 532 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03890.1 | phosphoinositide 4-kinase gamma 7. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. | 0 |
| RefSeq | XP_006395665.1 | phosphatidylinositol 4-kinase gamma 7 [Eutrema salsugineum] | 0 |
| Q9SI52 | Phosphatidylinositol 4-kinase gamma 7 OS=Arabidopsis thaliana OX=3702 GN=PI4KG7 PE=1 SV=2 | 0 | |
| TrEMBL | V4MN20 | 1-phosphatidylinositol 4-kinase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003797mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology