Basic Information
Locus ID:
Thhalv10003711m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 4583676 | 4589191 | - | Thhalv10003711m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 81,544.39 Da | 49.75 | 68.17 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 461 | 707 | 2.15051E-134 | - |
| CDD | cd00130 | PAS | 97 | 181 | 3.23935E-10 | IPR000014 |
| Pfam | PF13426 | PAS domain | 97 | 181 | 5.5E-7 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 455 | 707 | 4.9E-71 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 97 | 181 | 6.81E-14 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 438 | 707 | 1.04E-86 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 91 | 184 | 1.1E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 533 | 734 | 7.9E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 448 | 532 | 1.5E-31 | - |
| SMART | SM00220 | serkin_6 | 455 | 715 | 1.9E-60 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 96 | 181 | 3.1E-8 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 455 | 715 | 43.72142 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 574 | 586 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 634 | 656 | 8.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 615 | 625 | 8.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 529 | 542 | 8.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 678 | 700 | 8.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 568 | 586 | 8.1E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 415 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 36 | - | - |
| Coils | Coil | Coil | 6 | 33 | - | - |
| Coils | Coil | Coil | 734 | 734 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_024007009.1 | dual specificity protein kinase splA isoform X1 [Eutrema salsugineum] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | V4K482 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003711mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology