Basic Information
Locus ID:
Thhalv10003696m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 5174984 | 5177251 | + | Thhalv10003696m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 83,598.86 Da | 44.83 | 85.35 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 451 | 734 | 2.9835E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 449 | 731 | 2.0E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 423 | 733 | 1.75E-75 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 101 | 303 | 1.83E-18 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 411 | 534 | 3.6E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 535 | 745 | 1.4E-56 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 151 | 378 | 2.6E-21 | IPR009091 |
| SMART | SM00220 | serkin_6 | 445 | 737 | 5.1E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 445 | 737 | 38.251564 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 451 | 473 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 579 | 591 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_006395237.1 | serine/threonine-protein kinase-like protein CCR4 [Eutrema salsugineum] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | V4KYM0 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003696mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology