Basic Information
Locus ID:
Thhalv10003585m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_6 | 3766194 | 3769404 | + | Thhalv10003585m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 111,809.77 Da | 34.38 | 100.42 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 212 | 271 | 2.4E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 283 | 342 | 1.1E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 521 | 579 | 1.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 688 | 961 | 3.0E-49 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 60 | 2.0E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 65 | 122 | 1.3E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 239 | 602 | 7.22E-63 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 964 | 1.62E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 279 | 9.52E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 232 | 447 | 3.4E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 136 | 5.3E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 669 | 765 | 4.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 987 | 6.4E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 231 | 6.2E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 448 | 612 | 3.9E-44 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 543 | 567 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 305 | 329 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 61.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 495 | 519 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 209 | 233 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 86 | 110 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 205 | 310.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 686 | 969 | 2.1E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 282 | 304 | 360.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 686 | 969 | 36.668556 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 568 | 591 | 7.457832 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 815 | 827 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 692 | 715 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_006394841.1 | receptor-like protein kinase 5 [Eutrema salsugineum] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | V4KQ82 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003585mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology