Basic Information
Locus ID:
Thhalv10003493m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase RLK
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_18 | 2550446 | 2551735 | + | Thhalv10003493m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 47,503.53 Da | 32.83 | 93.67 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 58 | 2.0E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 348 | 429 | 4.0E-7 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 109 | 168 | 6.8E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 20 | 201 | 9.36E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 427 | 2.78E-12 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 130 | 224 | 2.1E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 307 | 419 | 9.7E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 129 | 1.3E-25 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 178 | 200 | 90.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 107 | 131 | 0.089 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 344 | 430 | 10.633728 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 317 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_006403084.2 | LOW QUALITY PROTEIN: pollen receptor-like kinase 1 [Eutrema salsugineum] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | V4LQ07 | Protein kinase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003493mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology