Basic Information
Locus ID:
Thhalv10003492m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_18 | 2546558 | 2549522 | - | Thhalv10003492m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 82,809.91 Da | 53.03 | 74.85 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 12 | 148 | 1.65569E-52 | - |
| CDD | cd14066 | STKc_IRAK | 422 | 682 | 1.16005E-84 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 418 | 620 | 4.4E-39 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 10 | 137 | 9.2E-12 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 390 | 675 | 8.23E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 10 | 136 | 4.27E-11 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 2 | 145 | 1.6E-11 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 382 | 488 | 2.8E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 690 | 1.0E-46 | - |
| SMART | SM00220 | serkin_6 | 416 | 679 | 1.1E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 416 | 679 | 34.392982 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 534 | 546 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 738 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 690 | 738 | - | - |
| Coils | Coil | Coil | 318 | 390 | - | - |
| Coils | Coil | Coil | 175 | 195 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35380.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_024013078.1 | U-box domain-containing protein 52 [Eutrema salsugineum] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | V4NEP5 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003492mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology