Basic Information
Locus ID:
Thhalv10003479m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_18 | 1289298 | 1290617 | - | Thhalv10003479m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 46,861.78 Da | 41.92 | 75.74 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 90 | 436 | 2.04944E-81 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 287 | 432 | 9.1E-30 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 91 | 264 | 1.4E-59 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 86 | 437 | 6.5E-94 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 66 | 262 | 5.5E-57 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 263 | 439 | 2.1E-47 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 91 | 432 | 45.459389 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 318 | 329 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 106 | 117 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_006403054.1 | aspartic proteinase CDR1 [Eutrema salsugineum] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | V4LPY0 | Peptidase A1 domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003479mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology