Basic Information
Locus ID:
Thhalv10003191m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_17 | 312912 | 316655 | + | Thhalv10003191m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.88 | 56,760.19 Da | 44.71 | 64.14 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14125 | STKc_CK1_delta_epsilon | 8 | 282 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 10 | 227 | 1.2E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 290 | 1.48E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 340 | 6.2E-112 | - |
| SMART | SM00220 | serkin_6 | 9 | 287 | 2.3E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 9 | 278 | 28.951391 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 124 | 136 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 15 | 38 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 320 | - | - |
| Coils | Coil | Coil | 473 | 493 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04340 (Hedgehog signaling pathway)
map04340 (Hedgehog signaling pathway)
ko04341 (Hedgehog signaling pathway - fly)
map04341 (Hedgehog signaling pathway - fly)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
ko04392 (Hippo signaling pathway - multiple species)
map04392 (Hippo signaling pathway - multiple species)
ko04710 (Circadian rhythm)
ko04711 (Circadian rhythm - fly)
map04711 (Circadian rhythm - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G44100.1 | casein kinase I-like 7. | 0 |
| RefSeq | XP_006403141.1 | casein kinase 1-like protein 7 isoform X1 [Eutrema salsugineum] | 0 |
| Q9FFH8 | Casein kinase 1-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CKL7 PE=2 SV=1 | 0 | |
| TrEMBL | V4LLJ4 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003191mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology