Basic Information
Locus ID:
Thhalv10003057m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_4 | 379813 | 382574 | + | Thhalv10003057m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 81,758.41 Da | 52.10 | 81.16 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 436 | 696 | 7.00578E-85 | - |
| CDD | cd01989 | STK_N | 14 | 149 | 5.51999E-57 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 433 | 684 | 3.9E-39 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 13 | 138 | 1.0E-16 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 413 | 683 | 7.65E-63 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 13 | 138 | 4.69E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 503 | 718 | 2.6E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 401 | 502 | 1.1E-26 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 2 | 146 | 2.7E-15 | IPR014729 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 430 | 693 | 33.318798 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 706 | 730 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 702 | 730 | - | - |
| Coils | Coil | Coil | 327 | 365 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G07020.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_024009581.1 | U-box domain-containing protein 35 [Eutrema salsugineum] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | V4LAR8 | Protein kinase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10003057mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology