Basic Information
Locus ID:
Thhalv10002608m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_4 | 6032834 | 6034262 | - | Thhalv10002608m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 37,457.75 Da | 33.83 | 91.45 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 73 | 317 | 1.9E-25 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 68 | 320 | 2.11E-39 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 132 | 325 | 8.8E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 20 | 131 | 7.0E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 17 | 320 | 19.86323 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11410.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006418749.1 | putative inactive serine/threonine-protein kinase At5g11400 [Eutrema salsugineum] | 0 |
| Q9LFL7 | Inactive serine/threonine-protein kinase BKN1 OS=Arabidopsis thaliana OX=3702 GN=BKN1 PE=2 SV=2 | 0 | |
| TrEMBL | V4KH80 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10002608mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10002608m.g.v1.0, Thhalv10014783m.g.v1.0 |
| Brassicaceae | Brassica nigra | 1 | BniB03g025600.2N |