Basic Information
Locus ID:
Thhalv10002436m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
LRR receptor-like serine threonine-protein kinase RLK
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_4 | 271364 | 273779 | + | Thhalv10002436m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 73,968.52 Da | 42.40 | 86.07 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 60 | 8.6E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 342 | 607 | 1.1E-31 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 204 | 1.57E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 342 | 611 | 6.21E-48 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 136 | 1.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 226 | 1.4E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 414 | 623 | 2.1E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 303 | 413 | 1.4E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 338 | 613 | 26.421406 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 313 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G07040.1 | Leucine-rich repeat protein kinase family protein. Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth. | 0 |
| RefSeq | XP_006396093.1 | pollen receptor-like kinase 2 [Eutrema salsugineum] | 0 |
| Q84JQ4 | Pollen receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PRK2 PE=1 SV=1 | 0 | |
| TrEMBL | V4L3K7 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10002436mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology