Basic Information
Locus ID:
Thhalv10002229m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
HSP81-3
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_12 | 10254418 | 10256531 | - | Thhalv10002229m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 78,476.18 Da | 38.81 | 82.77 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 14 | 182 | 1.60591E-88 | - |
| Pfam | PF00183 | Hsp90 protein | 164 | 675 | 5.6E-228 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 40 | 161 | 1.0E-10 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 246 | 501 | 4.17E-105 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 525 | 646 | 7.59E-37 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 5 | 191 | 9.26E-60 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 501 | 651 | 2.5E-65 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 245 | 413 | 6.8E-84 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 414 | 500 | 4.4E-39 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 2 | 210 | 3.0E-75 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 12 | 162 | 3.8E-4 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 34 | 2.7E-6 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 33 | 683 | 3.2E-224 | IPR001404 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 150 | 167 | 6.7E-30 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 5 | 25 | 6.7E-30 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 168 | 186 | 6.7E-30 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 2 | 647 | 24.724983 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 683 | - | - |
| Coils | Coil | Coil | 505 | 525 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56000.1 | HEAT SHOCK PROTEIN 81.4. | 0 |
| RefSeq | XP_013625619.1 | PREDICTED: heat shock protein 90-2-like [Brassica oleracea var. oleracea] | 0 |
| O03986 | Heat shock protein 90-4 OS=Arabidopsis thaliana OX=3702 GN=HSP90-4 PE=1 SV=1 | 0 | |
| TrEMBL | V4NUB6 | HATPase_c domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10002229mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology