Basic Information
Locus ID:
Thhalv10001948m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_12 | 10672762 | 10675817 | - | Thhalv10001948m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 64,384.12 Da | 42.50 | 67.94 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 121 | 483 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 125 | 419 | 6.4E-66 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 438 | 482 | 2.3E-5 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 96 | 472 | 3.1E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 206 | 437 | 6.9E-110 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 120 | 448 | 6.9E-110 | - |
| SMART | SM00133 | pkinase_C_6 | 420 | 484 | 2.1E-4 | IPR000961 |
| SMART | SM00220 | serkin_6 | 122 | 419 | 2.1E-105 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 122 | 419 | 47.947487 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 420 | 492 | 13.926411 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 241 | 253 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 128 | 151 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 514 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 540 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 304 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20470.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_006408965.1 | serine/threonine-protein kinase tricorner [Eutrema salsugineum] | 0 |
| Q15208 | Serine/threonine-protein kinase 38 OS=Homo sapiens OX=9606 GN=STK38 PE=1 SV=1 | 0 | |
| TrEMBL | V4MD42 | Serine/threonine-protein kinase tricorner-like OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001948mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology