Basic Information
Locus ID:
Thhalv10001782m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
kelch repeat-containing F-box family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_22 | 321541 | 324582 | + | Thhalv10001782m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 46,371.29 Da | 62.42 | 71.06 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 31 | 72 | 5.4E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 205 | 250 | 1.2E-11 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 29 | 71 | 2.49E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 128 | 377 | 1.7E-32 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 126 | 396 | 3.5E-30 | IPR015915 |
| SMART | SM00612 | kelc_smart | 217 | 264 | 9.0E-7 | IPR006652 |
| SMART | SM00256 | fbox_2 | 34 | 74 | 4.8E-6 | IPR001810 |
| SMART | SM00612 | kelc_smart | 163 | 215 | 0.63 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_024010744.1 | F-box/kelch-repeat protein At2g44130 [Eutrema salsugineum] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | V4N1R1 | F-box domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001782mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology