Basic Information
Locus ID:
Thhalv10001754m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
E3 ubiquitin-protein ligase RNF170-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_22 | 719983 | 721029 | + | Thhalv10001754m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 16,674.40 Da | 44.05 | 98.01 | 0.12 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45135.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_024010893.1 | uncharacterized protein LOC18015486 [Eutrema salsugineum] | 0 |
| TrEMBL | V4L9V4 | RING-type domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001754mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G45135.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10001754m.g.v1.0 |
| Brassicaceae | Brassica nigra | 1 | BniB06g003680.2N |