Basic Information
Locus ID:
Thhalv10001385m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_22 | 1142653 | 1145330 | + | Thhalv10001385m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 62,660.09 Da | 49.35 | 73.47 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 144 | 222 | 9.24626E-15 | - |
| Pfam | PF00651 | BTB/POZ domain | 141 | 236 | 7.9E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 262 | 354 | 2.5E-9 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 438 | 551 | 3.04E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 145 | 236 | 2.12E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 135 | 260 | 4.6E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 270 | 377 | 1.5E-12 | - |
| SMART | SM00225 | BTB_4 | 139 | 239 | 1.9E-9 | IPR000210 |
| SMART | SM00875 | BACK_2 | 254 | 356 | 3.3E-8 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 139 | 208 | 14.00476 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_006397813.1 | BTB/POZ domain-containing protein At2g46260 [Eutrema salsugineum] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | V4N279 | BTB domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001385mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology