Basic Information
Locus ID:
Thhalv10001379m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
phosphatidylinositol 3- and 4-kinase family protein ubiquitin family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_22 | 1230677 | 1233076 | - | Thhalv10001379m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 62,904.15 Da | 48.38 | 85.34 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 115 | 182 | 7.14355E-9 | - |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 259 | 508 | 9.2E-57 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 115 | 185 | 1.1E-8 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 40 | 107 | 3.4E-15 | IPR000626 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 556 | 1.84E-6 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 29 | 108 | 3.45E-15 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 107 | 184 | 1.04E-12 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 113 | 186 | 9.7E-11 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 32 | 112 | 1.9E-13 | - |
| SMART | SM00213 | ubq_7 | 34 | 106 | 0.014 | IPR000626 |
| SMART | SM00213 | ubq_7 | 111 | 184 | 0.088 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 37 | 106 | 13.053562 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 113 | 188 | 12.487402 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 44 | 64 | 5.7E-5 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 87 | 108 | 5.7E-5 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_006397840.1 | phosphatidylinositol 4-kinase gamma 4 [Eutrema salsugineum] | 0 |
| Q9ZPY9 | Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | V4LHM9 | 1-phosphatidylinositol 4-kinase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001379mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology