Basic Information
Locus ID:
Thhalv10001341m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_22 | 801407 | 804868 | + | Thhalv10001341m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 75,719.33 Da | 34.43 | 94.30 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 310 | 345 | 0.00866858 | - |
| CDD | cd14066 | STKc_IRAK | 425 | 689 | 2.92665E-105 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 66 | 5.4E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 686 | 2.1E-37 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 142 | 201 | 3.9E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 237 | 2.04E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 392 | 688 | 6.69E-56 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 261 | 1.6E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 693 | 1.6E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 386 | 497 | 6.4E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 138 | 4.3E-31 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 419 | 693 | 28.117485 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 308 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006397716.1 | probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Eutrema salsugineum] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | V4L696 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001341mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology