Basic Information
Locus ID:
Thhalv10001286m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_22 | 256156 | 261066 | - | Thhalv10001286m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 140,965.63 Da | 50.19 | 65.30 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 577 | 924 | 5.93562E-109 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 582 | 915 | 1.1E-16 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 554 | 945 | 6.62E-57 | IPR036691 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 211 | 556 | 2.75E-24 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 118 | 344 | 5.9E-11 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 559 | 955 | 2.6E-100 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 357 | 558 | 2.0E-5 | IPR015943 |
| SMART | SM00320 | WD40_4 | 257 | 295 | 0.026 | IPR001680 |
| SMART | SM00320 | WD40_4 | 473 | 510 | 8.9 | IPR001680 |
| SMART | SM00128 | i5p_5 | 575 | 930 | 1.3E-91 | IPR000300 |
| SMART | SM00320 | WD40_4 | 203 | 241 | 3.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1115 | 1252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1102 | 1275 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_006397563.1 | type I inositol polyphosphate 5-phosphatase 12 [Eutrema salsugineum] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | V4N1N8 | IPPc domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001286mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology