Basic Information
Locus ID:
Thhalv10000853m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_20 | 2062344 | 2063948 | + | Thhalv10000853m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 59,143.40 Da | 36.67 | 83.60 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 358 | 434 | 4.91657E-44 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 41 | 225 | 1.1E-46 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 365 | 410 | 3.6E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 364 | 432 | 1.57E-16 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 359 | 439 | 1.4E-15 | IPR036638 |
| SMART | SM00353 | finulus | 367 | 416 | 5.3E-14 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 361 | 410 | 16.519886 | IPR011598 |
| Coils | Coil | Coil | 407 | 434 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46830.1 | NACL-inducible gene 1. Calcium-binding transcription factor involved in salt stress signaling. | 0 |
| RefSeq | XP_006398377.1 | transcription factor bHLH28 [Eutrema salsugineum] | 0 |
| Q9LUK7 | Transcription factor bHLH28 OS=Arabidopsis thaliana OX=3702 GN=BHLH28 PE=2 SV=1 | 0 | |
| TrEMBL | V4KPJ8 | BHLH domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10000853mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology