Basic Information
Locus ID:
Thhalv10000819m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_20 | 2490748 | 2493832 | + | Thhalv10000819m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 72,737.61 Da | 40.06 | 82.47 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 324 | 618 | 5.84377E-126 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 293 | 604 | 6.5E-94 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 324 | 630 | 2.81E-68 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 326 | 623 | 8.1E-43 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 136 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 155 | - | - |
| Coils | Coil | Coil | 203 | 223 | - | - |
| Coils | Coil | Coil | 255 | 275 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_006398488.1 | probable galacturonosyltransferase 4 [Eutrema salsugineum] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | V4N3R4 | Hexosyltransferase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10000819mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology