Basic Information
Locus ID:
Thhalv10000680m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_15 | 736034 | 737121 | - | Thhalv10000680m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 40,379.86 Da | 51.39 | 79.29 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF117281 | Kelch motif | 55 | 318 | 3.14E-28 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 24 | 293 | 9.3E-15 | IPR015915 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02310.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_024014235.1 | putative F-box/kelch-repeat protein At4g02310 [Eutrema salsugineum] | 0 |
| O81414 | Putative F-box/kelch-repeat protein At4g02310 OS=Arabidopsis thaliana OX=3702 GN=At4g02310 PE=4 SV=1 | 0 | |
| TrEMBL | V4LUH0 | F-box domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10000680mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G02310.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10000440m.g.v1.0, Thhalv10000680m.g.v1.0 ... |