Basic Information
Locus ID:
Thhalv10000544m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_15 | 1690418 | 1691404 | + | Thhalv10000544m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 36,999.15 Da | 31.10 | 73.37 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 40 | 325 | 7.4E-31 | IPR024788 |
| Gene3D | G3DSA:2.60.120.430 | - | 37 | 183 | 4.8E-12 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 195 | 325 | 2.1E-17 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23200.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006404791.1 | probable receptor-like protein kinase At2g23200 [Eutrema salsugineum] | 0 |
| O22187 | Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana OX=3702 GN=At2g23200 PE=3 SV=1 | 0 | |
| TrEMBL | V4NIZ9 | Malectin_like domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10000544mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg30686, jg30687, jg30689, jg30691, jg30692, jg39988 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30205610 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G02862 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000544m.g.v1.0 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22992 |