Basic Information
Locus ID:
Thhalv10000089m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
SAE2
Description:
sumo-activating enzyme
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_15 | 235049 | 238790 | + | Thhalv10000089m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 69,985.73 Da | 50.44 | 87.51 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01489 | Uba2_SUMO | 14 | 435 | 0.0 | - |
| Pfam | PF00899 | ThiF family | 5 | 407 | 1.7E-73 | IPR000594 |
| Pfam | PF14732 | Ubiquitin/SUMO-activating enzyme ubiquitin-like domain | 442 | 534 | 7.6E-22 | IPR028077 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 318 | 369 | 8.7E-6 | IPR019572 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 6 | 503 | 1.44E-104 | IPR035985 |
| Gene3D | G3DSA:3.50.50.80 | - | 3 | 108 | 1.9E-34 | IPR042449 |
| Gene3D | G3DSA:1.10.10.520 | Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 | 163 | 374 | 1.0E-52 | IPR023318 |
| Gene3D | G3DSA:3.10.290.20 | - | 435 | 613 | 2.6E-30 | - |
| PIRSF | PIRSF039133 | SUMO_E1B | 3 | 614 | 1.7E-186 | IPR030661 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 577 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 626 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 287 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21470.1 | SUMO-activating enzyme 2. Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein. | 0 |
| RefSeq | XP_006404595.1 | SUMO-activating enzyme subunit 2 [Eutrema salsugineum] | 0 |
| Q9SJT1 | SUMO-activating enzyme subunit 2 OS=Arabidopsis thaliana OX=3702 GN=SAE2 PE=1 SV=1 | 0 | |
| TrEMBL | V4M1I2 | SUMO-activating enzyme subunit OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10000089mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg28785 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_21673 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah010197 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g216990 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12395, Sbi_jg45940 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg20278 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022483 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl56036, Sgl56166, Sgl61370, Sgl61607 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000014533, gene:ENSEOMG00000036498 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7BG0007270, CQ.Regalona.r1.9AG0017290 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30115240 |
| Apiaceae | Apium graveolens | 2 | Ag7G01288, Ag7G01289 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G017220, COCNU_16G001210 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103697019, gene-LOC103712329 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.1814.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G22482 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G21470.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000089m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g00630.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g022650.2N, BniB02g017260.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1550 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G1648 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g12340 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0164s00010.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g14280 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG06.1435, evm.TU.LG08.182 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00010217 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb3G17346, Lb7G34921 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.3531, BH03.3751, CH03.3964 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0574940, gene-QOZ80_7BG0606290 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0129980.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_040026 |
| Poaceae | Oryza coarctata | 2 | Oco13G011320, Oco14G012080 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g39780.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G332300 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0304650, Pt_Chr0304671 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr19G003250, Chr24G011380, Chr27G013980, Chr28G010580 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G358400, Tel5E01G422600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG024630, gene_TRIDC2BG028420 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G192200.1, TraesCS2B02G214100.3 ... |
| Poaceae | Zea mays | 2 | Zm00001eb108060_P001, Zm00001eb325940_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-32802, nbis-gene-547 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g5459, Zma_g6742 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG08.1787, evm.TU.LG22.61 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g03680 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.2245 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14072 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-3304 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.116 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016828 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4676 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-14165, nbisL1-mrna-25198 |
| Salicaceae | Populus euphratica | 2 | populus_peu08835, populus_peu36517 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599200 |
| Solanaceae | Solanum chilense | 1 | SOLCI007335900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107008183 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.11473_chr02_-, gene_16843 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G0436 |
| Zosteraceae | Zostera marina | 2 | Zosma04g00220.v3.1, Zosma06g23720.v3.1 |