Basic Information
Locus ID:
Thhalv10000081m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_15 | 2452231 | 2455762 | - | Thhalv10000081m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 70,127.47 Da | 39.53 | 93.98 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 304 | 570 | 9.0E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 126 | 186 | 1.2E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 8.2E-13 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 207 | 4.56E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 285 | 573 | 8.25E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 217 | 3.3E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 380 | 592 | 5.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 379 | 3.4E-33 | - |
| SMART | SM00220 | serkin_6 | 303 | 558 | 2.1E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 303 | 558 | 35.778114 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 127 | 149 | 7.388525 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 422 | 434 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 309 | 331 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 128 | 141 | 6.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 173 | 186 | 6.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006404888.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Eutrema salsugineum] | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 0 | |
| TrEMBL | V4NJ76 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10000081mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology